On Tue, Jul 17, 2012 at 3:50 AM, Gerard Pujadas
gerard.pujadas]*[
gmail.com <owner-chemistry!^!ccl.net> wrote:
Dear CCL list members,
first of all, sorry for
cross-posting
I
would like to know if there is available any webserver (or software)
that can draws topological diagrams for PDB files following the idea
that was implemented some years ago at the TOPS webserver (http://www.tops.leeds.ac.uk/).
This server is not running since 2008 and it was quite useful in order to
teach the protein architecture to my students. Currently PDBSum provides
topological diagrams for PDB entries (http://kpwu.wordpress.com/2006/02/14/pdbsum-announces-topology-diagrams-for-protein-domains/)
but, in my opinion, those formerly provided by TOPS where more
intuitive to correlate the diagram with the folding of the domain ...
With many thanks in advances
Yours sincerely
--
Gerard Pujadas
http://bioquimica.urv.cat/eng/fitxa.jsp?id=22
Nutrigenomics Research Group
phone +34 977 55 (9565)
Biochemistry and Biotechnology Department
Office 106, Building N4, Campus
Sescelades
Universitat Rovira i Virgili
Tarragona, Catalonia