CCL: Autodock4 error message parsing dlg output file



 Sent to CCL by: "Gianluca  Rossato" [gianluca.rossato|,|gmail.com]
 Hi everyone,
 I did a virtual screening using a list of small ligands using Autodock4, I
 wrote some c shell scripts to do it automatically and I prepared all the
 pdbqt files, grid and input files. The autodock4 script runs properly; Reading
 the output files with a text editor they looks correct retrieving scoring and
 energy values as usual.
 When I try to analyze the docking output with ADT, in the python shell I
 have this error message..
 Could someone help me?
 Thank you in advance
 Gianluca
 IDLE 1.2.1      ==== No Subprocess ====
 >>> ERROR *********************************************
 Traceback (most recent call last):
  File "MGLToolsPckgs/ViewerFramework/VF.py", line 716, in tryto
    result = apply( command, args, kw )
  File
 "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/autoanalyzeCommands.py",
 line 2818, in doit
    d.readDlg(dlgFile)
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/Docking.py", line
 74, in
 readDlg
    dlo = DockingLogObject(self, dlgFile)
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/Docking.py", line
 337, in
 __init__
    parser.parse(filename)
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/DlgParser.py", line
 106,
 in parse
    self.match(allLines)
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/DlgParser.py", line
 219,
 in match
    apply(d['func'], (lines,), {})
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/DlgParser.py", line
 679,
 in getModelLines
    self.makeModels(modelList)
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/DlgParser.py", line
 775,
 in makeModels
    clist.append(self.makeModel(curMod))
  File "MGLTools-1.5.1/MGLToolsPckgs/AutoDockTools/DlgParser.py", line
 799,
 in makeModel
    d['run'] = int((ll)[3])
 ValueError: invalid literal for int() with base 10:
 'MGLTools-1.5.1/bin/NET/DockingRun_v01_080714/ZINC00013562_NET/ZINC00013562_NET_protein_v02.dpf'