Yes ChemAxon can help there.
Either you can run these structures through our structure to name Calculator Plugin (http://www.chemaxon.com/product/st2name.html) as batch from the command line utility cxcalc (http://www.chemaxon.com/marvin/doc/user/calc.html) or if you want an application GUI then the same Plugin is implemented in Instant JChem (http://www.chemaxon.com/product/ijc.html).
If you are an academic user all of our software is free, more information and sign up: http://www.chemaxon.com/acpack_conditions.html
Alex Allardyce Dir. Marketing, ChemAxondrmsaravanan=aim.com wrote: