From owner-chemistry@ccl.net Thu May 18 07:57:00 2006 From: "Nathan Scott scottjn_+_gmail.com" To: CCL Subject: CCL: QM/MM computational cost? Message-Id: <-31774-060517104442-10910-T6e7N3FE/I0xmQSJ/bwuvg!^!server.ccl.net> X-Original-From: "Nathan Scott" Content-Type: multipart/alternative; boundary="----=_Part_73405_27921155.1147873290092" Date: Wed, 17 May 2006 09:41:30 -0400 MIME-Version: 1.0 Sent to CCL by: "Nathan Scott" [scottjn(!)gmail.com] ------=_Part_73405_27921155.1147873290092 Content-Type: text/plain; charset=ISO-8859-1; format=flowed Content-Transfer-Encoding: quoted-printable Content-Disposition: inline Greetings CCLers. Can anyone point me to a reference discussing the computational cost of QM/MM simulations and how it scales with size of the components? I have some experience with quantum chemistry simulations, as well as molecular dynamics simulations, but I'm new to QM/MM and am being asked as part of a proposal I'm writing to discuss the computational cost o= f the calculations I want to do. Right now the plan is to solvate a simple 6 atom quantum mechanical system with approximately 1000 TIP4P water molecules. Thanks in advance for any help you can provide. J. Nathan Scott Graduate Student University of Pennsylvania Biochemistry and Molecular Biophysics Graduate Group Work Phone: +1.215.898.8783 ------=_Part_73405_27921155.1147873290092 Content-Type: text/html; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable Content-Disposition: inline Greetings CCLers.  Can anyone point me to a reference discussing the c= omputational cost of QM/MM simulations and how it scales with size of the c= omponents?  I have some experience with quantum chemistry simulations,= as well as molecular dynamics simulations, but I'm new to QM/MM and am bei= ng asked as part of a proposal I'm writing to discuss the computational cos= t of the calculations I want to do.  Right now the plan is to solvate = a simple 6 atom quantum mechanical system with approximately 1000 TIP4P wat= er molecules.


Thanks in advance for any help you can provide.

J. Natha= n Scott
Graduate Student
University of Pennsylvania
Biochemistry a= nd Molecular Biophysics Graduate Group
Work Phone: +1.215.898.8783
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