From owner-chemistry: at :ccl.net Sun Nov 23 19:50:01 2008 From: "Anuradha Mittal amitta2++uic.edu" To: CCL Subject: CCL: build missing residues in pdb Message-Id: <-38150-081123194748-29366-0tFPSyCEWmCOfjLiq9O69g*server.ccl.net> X-Original-From: "Anuradha Mittal" Content-Type: multipart/alternative; boundary="----=_Part_145584_32255696.1227487657152" Date: Sun, 23 Nov 2008 18:47:37 -0600 MIME-Version: 1.0 Sent to CCL by: "Anuradha Mittal" [amitta2_-_uic.edu] ------=_Part_145584_32255696.1227487657152 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit Content-Disposition: inline Hi all, I need to simulate a protein but it is missing some residues in its pdb file. Is there any way I can add these missing residues? I tried Swiss-PdbViewer, but it doesn't seem do a great job. Even after minimization, the bonds remain grossly distorted. Any help will be much appreciated! Thanks Anu ------=_Part_145584_32255696.1227487657152 Content-Type: text/html; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit Content-Disposition: inline
Hi all,

I need to simulate a protein but it is missing some residues in its pdb file. Is there any way I can add these missing residues?
I tried Swiss-PdbViewer, but it doesn't seem do a great job. Even after minimization, the bonds remain grossly distorted.
Any help will be much appreciated!

Thanks
Anu
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