From owner-chemistry-: at :-ccl.net Tue May 9 05:49:00 2006 From: "Marcin Krol mykrol-.-cyf-kr.edu.pl" To: CCL Subject: CCL:G: Calculation of pka Message-Id: <-31714-060509054751-9414-ZybRhjhzkf1PcfbBeBGiIw(~)server.ccl.net> X-Original-From: Marcin Krol Content-Type: TEXT/PLAIN; charset=US-ASCII Date: Tue, 9 May 2006 11:47:41 +0200 (METDST) MIME-Version: 1.0 Sent to CCL by: Marcin Krol [mykrol(_)cyf-kr.edu.pl] Hi, It depends on how accurately you want to calculate pKa and how much time you want to spend doing it. You can either use a free pKa calculator such as Sparc - http://ibmlc2.chem.uga.edu/sparc/ very quick, but probably accuracy depends on your molecule belonging to the test set. Check their reference, I can't open it. Or you can go the tedious way and calculate it from first principles (eg in gaussian, see eg. Liptak etal. JACS 2002 124:6421, Gao etal. JPCA 2005 109:10776), but you are also not guaranteed to get good results (my own experience). Hope this helps marcin > Sent to CCL by: kevin abbot [kevanabbot=-=yahoo.com] > > --0-147654940-1147098689=:16061 > Content-Type: text/plain; charset=iso-8859-1 > Content-Transfer-Encoding: 8bit > > Hi folks, > My question is really simple: are there some programs (free of charge) > that permit to calculate pka of a determinated compound? > > Any help is appreciated > > Kevin