From berkley -A_T- wubs.wustl.edu Thu Sep 10 08:57:13 1992 Date: Thu, 10 Sep 92 13:57:13 -0500 From: berkley;at;wubs.wustl.edu (Berkley Shands) To: chemistry;at;ccl.net Subject: Receptor Timings Again Receptor (TM - Tripos Associates) Beta version V2.3 timings for the ACE series at four and two degree scans. The first molecule in the series is five rotatable bonds. Runtimes reported for V2.3 are truncated to the nearest integer second for compatibility with V2.2. The 4 and 2 degree scans converge to one cluster of two points. A post-processed run has 14 points in two clusters. A run with an automatically generated, variable scan parameter ranging from 2.8 to 0.86 degrees yeilds 5 points in two clusters without post-processing. ******************************************************************************* Benchmarks of the complete ACE series of 71 molecules at four degrees ******************************************************************************* Top CPU Top Elps Top Sys Chg CPU Chg Elps CPU Type and notes ======= ======== ======= ======= ======== ================== XXXX XXXX XXXX 181 XXXX IRIS Indigo (IP12) Receptor V2.2 741 772 198 484 688 VS3520 32mb VMS 5.5-2+VIP 120 148 10 67 83 SUN 4mp Sparc 690 64Mb 4-cpu system 125 143 4 68 86 SUN 4/c SPARCstation 2 28mb 83 153 11 55 95 ESV M120 R3000A %-% at %-% 25Mhz 100 138 2 46 64 IBM RS-6000-320H 32mb (AIX 3.2.1) 65 86 11 40 50 IRIS Indigo (IP12) 48mb R3000A %-% at %-% 35Mhz 71 91 3 43 57 IRIS 4d/380 (IP7) 128mb R3000A- at -35Mhz 63 187 3 34 91 IBM RS-6000-550 64mb (AIX 3.2.1) 49 64 1 23 32 IBM RS-6000-560 96mb (AIX 3.2.1) ******************************************************************************* Benchmarks of the complete ACE series of 71 molecules at two degrees Theoretical conformations counts range from 10^6 to 10^20 at two degrees. (Don't try this with Systematic Search, folks) ******************************************************************************* Top CPU Top Elps Top Sys Chg CPU Chg Elps CPU Type and notes ======= ======== ======= ======= ======== ================== XXXX XXXX XXXX 8905 XXXX IRIS Indigo (IP12) Receptor V2.2 XXX 3968 XXX 5721 6066 VS3520 32mb VMS 5.5-2+VIP 731 776 6 669 706 SUN 4/c SPARCstation 2 28mb 661 713 5 625 654 ESV M120 R3000A-: at :-25Mhz 631 683 2 573 603 IBM RS-6000-320H 32mb (AIX 3.2.1) 512 346 27 487 514 IRIS 4d/380S (IP7) 128mb 3/8 CPUs 502 568 24 475 526 IRIS Indigo (IP12) 48mb R3000A -A_T- 35Mhz 356 378 2 323 334 IBM RS-6000-550 64mb (AIX 3.2.1) 300 317 1 268 286 IBM RS-6000-560 96mb (AIX 3.2.1) ******************************************************************************* The ace-28 series ran 84,413 seconds with V2.2 and 8,718 with V2.3 at 2 degrees. ******************************************************************************* Notes: "Top CPU" is the recorded total CPU for all forked processes, including overhead and I/O. "Top Elps" is the recorded elapsed time from command line parsing to the exit of the last child processes. "Top Sys" is the recorded UNIX system overhead from the times() function "Chg CPU" is the algorithmic chargable time from initial rotations to termination (child process CPU) "Chg Elps" is the elapsed time spent rotating and computing.