From chemistry-request@ccl.net Wed Sep 4 08:36:59 1991 Date: Wed, 4 Sep 1991 07:25 CDT From: 6031SCHRADER@vmsf.csd.mu.edu Subject: Excitation of H2 by e- scattering To: chemistry@ccl.net Status: R Help! Can anyone tell me what the cross section for excitation of H2 to its B state by electron scattering is? Or give me some hints on where to look for this information? David Schrader Chemistry Dept. Marquette University Milwaukee, WI USA From jkl@ccl.net Wed Sep 4 10:06:22 1991 Date: Wed, 4 Sep 91 10:06:18 -0400 From: jkl@ccl.net To: chemistry@ccl.net Subject: MD Trajectories Status: R I am forwarding the message to the list: ---------- Begin Forwarded Message ---------- >From ravishan@swan.wesleyan.edu Wed Sep 4 09:21:53 1991 Date: Wed, 4 Sep 91 09:23:07 EDT From: G. Ravishanker To: chemistry-request@ccl.net Subject: MD Trajectories Hi We do a lot of MD simulations using any one of the widely available packages. The simulations are performed on various models of DNA and proteins in vacuum or in water. We save 40 structures (of the solute and the waters if there are any waters) per picosecond. Most of our analysis is done on structures extracted at every .5 psec. There is some arbitrariness attached to saving 40 structures/ps, I think. It is getting to a point where our disks are always filled, because the trajectory files are getting to be just too large. I would like to hear >from other practitioners in the field, how many structures they save, if there is any magic number that one has come up with and any rationale behind it. Thank you very much. Ravi ----------- End Forwarded Message ----------- From chemistry-request@ccl.net Wed Sep 4 22:04:26 1991 Date: Wed, 4 Sep 1991 21:58 EDT From: EWING@JCVAXA.JCU.EDU Subject: Molecular Modeling Software To: chemistry@ccl.net Status: R I'm looking for molecular modeling software for the DECstation (running ULTRIX) or the PC. Specifically: 1. I understand that MACROMODEL isn't distributed by Prof. Still for the DECstation. Does anyone know of a DECstation version? 2. How do I get a copy of PCMODEL? 3. Who do I contact about getting SYBYL? Thanks! --------------------------------------------------------------------------- David W. Ewing Internet: ewing@jcvaxa.jcu.edu Department of Chemistry Bitnet: ewing@jcuvax John Carroll University Voice: (216) 397-4742 or 397-4241 Cleveland, OH 44118 USA Fax: (216) 397-4256