From owner-chemistry@ccl.net Thu May 31 04:58:01 2007 From: "Xavier Assfeld Xavier.Assfeld{:}cbt.uhp-nancy.fr" To: CCL Subject: CCL: A Comprehensive book on theoretical chemistry Message-Id: <-34379-070531044009-23870-Kn5tvvLo2yEB7J+OeKym0Q * server.ccl.net> X-Original-From: "Xavier Assfeld" Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset="iso-8859-1" Date: Thu, 31 May 2007 10:00:10 +0200 MIME-Version: 1.0 Sent to CCL by: "Xavier Assfeld" [Xavier.Assfeld * cbt.uhp-nancy.fr] Hey, If you are looking for a good book, look at: Ideas of Quantum Chemistry by Lucjan Piela. http://www.elsevier.com/wps/find/bookdescription.cws_home/708726/description #description Pr. Xavier Assfeld Chimie et Biochimie Théoriques, UMR 7565 BP 239, Faculté des Sciences et Techniques 54506 Vandoeuvre-lès-Nancy Cedex, France Xavier.Assfeld+/-cbt.uhp-nancy.fr From owner-chemistry@ccl.net Thu May 31 05:36:01 2007 From: "Ramon Crehuet rcsqtc+/-iiqab.csic.es" To: CCL Subject: CCL: A Comprehensive book on theoretical chemistry Message-Id: <-34380-070530110053-1178-I+IpyBfPZJZgo7cmBTvyQA^server.ccl.net> X-Original-From: Ramon Crehuet Content-Transfer-Encoding: 7bit Content-Type: text/html; charset=ISO-8859-1 Date: Wed, 30 May 2007 16:02:00 +0200 MIME-Version: 1.0 Sent to CCL by: Ramon Crehuet [rcsqtc:iiqab.csic.es] Hi,
I would also suggest: "An introduction to Theoretical Chemistry" by Jack Simons. In terms of quantum methods it has less coverage than most of the titles that have been suggested, but it includes some basics of statistical mechanics and chemical dynamics that are also useful to most theoretical chemists.
cheers,
Ramon




En/na Wai-To Chan chan_+_curl.gkcl.yorku.ca ha escrit:
Sent to CCL by: Wai-To Chan [chan**curl.gkcl.yorku.ca]
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
Hi,
 I am a senior pharmacy undergrad, Minia, Egypt. I am studting theoretical
 chemistry independently as I hope I pursue my PhD research in it.
 I am currently studying books like Introduction to Computational Chemistry,
 Frank Jensen, Essentials of Computational Chemistry, Christopher Cramer, and
 some web material.
 I am really looking for a book that provides a comprehensive view on
 computational techniques and methods, including essentials of theory and
 formalism, in addition to exercises and worked examples, meaningly, a book that
 helps me teach myself the subjet. Noteworthy, I have already get a good
 knowledge base in math, Computer Science and quantum mechanics, in addition to
 the fundamentals of the electronic structure theory.
 thanks in advance
  
 
                                                              
   
 For some years one might expect a BSc holder graduating from a 'standard' 
 chemistry program in a decent North American university to possess a familarity 
of the basics in theoretical chemistry at the level of the quantum chemistry textbook 
by Levine and the statistical thermodynamics text by McQuarrie. 
In my own schooling other courses outside chemistry which I consider
important to post-graduate research include Fortran programming, 
differential equations and vector calculus. To this day I still kick myself for 
not taking any 2nd year physics courses in E&M and special relativity. 

In reality standard varies. Nowadays advanced physical 
chemistry courses in statistical mechanics and quantum chemistry
are seldom required in  a typical chemistry curriculum  
Here in Canada I've seen people who had no difficulties 
completing a phd in the field of computational quantum chemistry 
without any formal schooling in quantum chemistry beyond McQuarrie's 
introductory text and without writing a single line of code. 
So if you have a good basic knowledge of quantum chemistry 
at a level comparable to Levine, Pilar or John Lowe you are 
already reasonably well equipped for graduate studies by the 
standard here. 

  My impression is that theoretical chemistry research has attained a
level of maturity in the field of the application of quantum chemistry 
such that a rigorous study of the fundamentals is not always absolutely 
essential although some exposure is certainly desirable. I would suggest 
you to tailor your study to the area of interest you intend to pursue. 

  Suppose you are looking to graduate research in methodological developments
in electronic structure theory and you want to engage in the coding of 
a  sophisticated ccsd(t) method in a quantum chemistry package. 
In such case a mastery of the theries beyond elementary quantum chemistry text 
in a book like "Methods of molecular quantum mechanics" by Roy McWeeny 
(which includes extensive problem sets) should be very helpful. 
If on the other hand you are interested in
something less theoretical say a project that involves   	
applying theory to biochemistry you might be more concerned with 
the aspects of the execution of various quantum chemistry
softwares. The level of understanding of the background theory required really
depends on the nature of your research. In computational 
quantum chemistry research it is usually an understanding of Pople's 
model chemistry rather than the underlying mathematics of the model employed that enables 
a laboratory chemist to obtain and interpret the computational results. 
Chance is you have more to worry about understanding the chemistry than 
the theory you are applying. 

Your choice of Jensen and Cramer for your self-study seems fine. 
 It may be prudent if you can supplement your study through running computations with 
a quantum chemistry program such as GAMESS. Experience in the implementation
of free quantum chemistry software in Linux should help you to prepare for future
research. You could for instance install GAMESS on a 
PC and use the program to try out some problems described in a quantum chemistry
text. You can also learn to install other useful (and free) softwares such as MOLDEN 
for the visualization of output files from running GAMESS. 

There are other areas in theoretical chemistry  which place less emphasis on 
quantum chemistry. I don't think there is any single comprehensive theoretical 
chemistry that will give you an overview of the entire field. However you may 
take a look on "Quantum Mechanics in Chemistry" by George Schatz and Mark Ratner. 
This textbook is unique in that it cover concepts other than those of quantum 
chemistry and should provide a good starting point if you want 
to pursue research in areas that deal with chemical dynamics. 

Wai-To ChanE-mail to subscribers: CHEMISTRY~~ccl.net or use:
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From owner-chemistry@ccl.net Thu May 31 06:10:00 2007 From: "Per Jr. Greisen pgreisen . gmail.com" To: CCL Subject: CCL: CHARMM: SCCDFTB GHO Message-Id: <-34381-070531052214-5570-fiEbAZGe9n//KFifYUHeUg#server.ccl.net> X-Original-From: "Per Jr. Greisen" Content-Type: multipart/alternative; boundary="----=_Part_18388_27991760.1180599855550" Date: Thu, 31 May 2007 10:24:15 +0200 MIME-Version: 1.0 Sent to CCL by: "Per Jr. Greisen" [pgreisen^gmail.com] ------=_Part_18388_27991760.1180599855550 Content-Type: text/plain; charset=ISO-8859-1; format=flowed Content-Transfer-Encoding: 7bit Content-Disposition: inline Hi, I am trying to do a qm/mm simulation using the CHARMM program where I would like to use the scc-dftb method for the qm part of my system. I get into to problems as I am not able to split the system into two regions and get the following statement CHARMM> SCCDFTB remove exgr chrg 0 SELE qm END GLNK sele bgho end SELRPN> 58 atoms have been selected out of 11446 SCCINT> GLNK: GHO boundary atoms are used SELRPN> 6 atoms have been selected out of 11446 but later on it gives me these statements SCCINT: Quantum mechanical GHO boundary atoms: NONE. SCCDFN> Some atoms will be treated quantum mechanically. The number of SCCDFTB QM atoms = 58 The number of molecular mechanical atoms = 11388 The number of MM atoms excluded from QM = 0 Of which the number of QM/MM link atoms = 0 so it has not used the GHO method for linking the atoms. I have been looking at the charmm forum but without any luck. Any help or advise appreciated. Thanks in advance. Best regards Per ------=_Part_18388_27991760.1180599855550 Content-Type: text/html; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit Content-Disposition: inline Hi,

I am trying to do a qm/mm simulation using the CHARMM program where I would like to use the scc-dftb method for the qm part of my system. I get into to problems as I am not able to split the system into two regions and get the following statement

 CHARMM>    SCCDFTB remove exgr chrg 0 SELE qm END GLNK sele bgho end
 SELRPN>     58 atoms have been selected out of  11446
 SCCINT> GLNK: GHO boundary atoms are used
 SELRPN>      6 atoms have been selected out of  11446

but later on it gives me these statements


SCCINT: Quantum mechanical GHO boundary atoms:
          NONE.

 SCCDFN> Some atoms will be treated quantum mechanically.

         The number of SCCDFTB        QM  atoms   =    58
         The number of molecular mechanical atoms = 11388
         The number of MM atoms excluded from QM  =     0
         Of which the number of QM/MM link atoms  =     0

so it has not used the GHO method for linking the atoms. I have been looking at the charmm forum but without any luck.

Any help or advise appreciated. Thanks in advance.

Best regards

Per
------=_Part_18388_27991760.1180599855550-- From owner-chemistry@ccl.net Thu May 31 07:03:00 2007 From: "Karol Langner karol.langner+/-kn.pl" To: CCL Subject: CCL: A Comprehensive book on theoretical chemistry Message-Id: <-34382-070531065502-6479-4/XmYvXzvr5FsXVTkJalKw.:.server.ccl.net> X-Original-From: Karol Langner Content-Disposition: inline Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset="iso-8859-1" Date: Thu, 31 May 2007 11:54:34 +0200 MIME-Version: 1.0 Sent to CCL by: Karol Langner [karol.langner(-)kn.pl] On Thursday 31 May 2007 10:00, Xavier Assfeld Xavier.Assfeld{:}cbt.uhp-nancy.fr wrote: > Sent to CCL by: "Xavier Assfeld" [Xavier.Assfeld * cbt.uhp-nancy.fr] > Hey, > > If you are looking for a good book, look at: > Ideas of Quantum Chemistry by Lucjan Piela. > http://www.elsevier.com/wps/find/bookdescription.cws_home/708726/description #description Yes, I recommend this book, also. I have it (the older, Polish version) and value it highly. - Karol -- written by Karol Langner Thu May 31 11:53:41 CEST 2007 From owner-chemistry@ccl.net Thu May 31 10:13:00 2007 From: "Alex A. Granovsky gran[#]classic.chem.msu.su" To: CCL Subject: CCL: Running GAMESS on Windows Message-Id: <-34383-070531091502-13861-1dQNvUFPoxi2TC/DAAuBqg**server.ccl.net> X-Original-From: "Alex A. Granovsky" Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset="iso-8859-1" Date: Thu, 31 May 2007 17:05:17 +0400 MIME-Version: 1.0 Sent to CCL by: "Alex A. Granovsky" [gran[-]classic.chem.msu.su] Hi, > manual. However for future production work, make sure to learn what is > *nix, and you can eat it :^) What's the reason for this statement? PC GAMESS runs equally fast under Windows and Linux, and there are many cases when Windows version is somewhat faster (e.g., jobs which require lots of memory and lots of disk I/O at the same time). Best regards, Alex Granovsky ----- Original Message ----- > From: "Alexandr Isayev alex(_)ccmsi.us" To: "Granovsky, Alex, A. " Sent: Thursday, May 31, 2007 4:27 AM Subject: CCL: Running GAMESS on Windows > > Sent to CCL by: Alexandr Isayev [alex*_*ccmsi.us] > Mustafa, > > Get a PC GAMESS from Alexandr Granovsky http://classic.chem.msu.su/gran/gamess/ > It natively runs under windows environment and has comprehensive > manual. However for future production work, make sure to learn what is > *nix, and you can eat it :^) > > hope this will help, > Alexandr > > Wednesday, May 30, 2007, 5:25:00 PM, you wrote: > > MHmhyc> Sent to CCL by: "Mustafa Hussein" [mustafa.hussein86,yahoo.com] > MHmhyc> Hi, > MHmhyc> I have got a copy of GAMESS. I need to run it on Windows; is > MHmhyc> it possible? If it is, I appreciate if you tell me how. > > MHmhyc> Thanks > > MHmhyc> Mustafa > > > > MHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhyc> Conferences: > MHmhyc> http://server.ccl.net/chemistry/announcements/conferences/ > > MHmhycMHmhycMHmhycMHmhycMHmhyc------------------------------------------------------- > Alexandr Isayev, > Graduate Research Assistant, and System Administrator > [A] Computational Center for Molecular Structure > and Interactions (CCMSI), > Jackson State University, > Jackson, MS USA > Tel: +(601) 979-1134 > e-mail: alex(at)ccmsi.us > Web: http://www.ccmsi.us > --------------------------------------------------------> > > > From owner-chemistry@ccl.net Thu May 31 12:05:00 2007 From: "Nuno A. G. Bandeira nuno.bandeira(~)ist.utl.pt" To: CCL Subject: CCL: Running GAMESS on Windows Message-Id: <-34384-070531120247-18781-S5C7zrNjV0bzhM9dwgPLXQ:server.ccl.net> X-Original-From: "Nuno A. G. Bandeira" Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset=ISO-8859-1; format=flowed Date: Thu, 31 May 2007 17:02:32 +0100 MIME-Version: 1.0 Sent to CCL by: "Nuno A. G. Bandeira" [nuno.bandeira~!~ist.utl.pt] Alex A. Granovsky gran[#]classic.chem.msu.su wrote: > Sent to CCL by: "Alex A. Granovsky" [gran[-]classic.chem.msu.su] > Hi, > >> manual. However for future production work, make sure to learn what is >> *nix, and you can eat it :^) > What's the reason for this statement? PC GAMESS runs equally fast under Windows and Linux, > and there are many cases when Windows version is somewhat faster (e.g., jobs which require > lots of memory and lots of disk I/O at the same time). Unix geeks like to make everybody smarter :-D -- Nuno A. G. Bandeira, AMRSC Graduate researcher and molecular sculptor Inorganic and Theoretical Chemistry Group, Faculty of Science University of Lisbon - C8 building, Campo Grande, 1749-016 Lisbon,Portugal http://cqb.fc.ul.pt/intheochem/nuno.html Doctoral student -,- IST,Lisbon -- From owner-chemistry@ccl.net Thu May 31 14:45:00 2007 From: "Alexandr Isayev alex===ccmsi.us" To: CCL Subject: CCL: Running GAMESS on Windows Message-Id: <-34385-070531144412-21145-Zay2eQ5fXC72GWGpVUTeMA*server.ccl.net> X-Original-From: Alexandr Isayev Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset=us-ascii Date: Thu, 31 May 2007 13:42:38 -0500 MIME-Version: 1.0 Sent to CCL by: Alexandr Isayev [alex : ccmsi.us] AAGgccms> What's the reason for this statement? PC GAMESS runs AAGgccms> equally fast under Windows and Linux, AAGgccms> and there are many cases when Windows version is somewhat AAGgccms> faster (e.g., jobs which require AAGgccms> lots of memory and lots of disk I/O at the same time). hi, sorry if I explained not really clear. This statement is not about any particular code, especially GAMESS. This is great code, and I really appreciate you hard work! And obviously I have no objections to Windows :) However, how many supercomuters, clusters, etc runs under Windows? Unfortunately not everything can be calculated even on descent workstation. In this situation one should rely on HPC. IMO, this is essential to have at least some *basic knowledge* about linux OS, enough to write batch script, submit your job and analyze results. Greetings, Alexandr P.S. I hope this will not be considered as yet another Windows vs. Linux, Inter vs. AMD tread :^) AAGgccms> Best regards, AAGgccms> Alex Granovsky AAGgccms> ----- Original Message ----- >> From: "Alexandr Isayev alex(_)ccmsi.us" AAGgccms> To: "Granovsky, Alex, A. " AAGgccms> Sent: Thursday, May 31, 2007 4:27 AM AAGgccms> Subject: CCL: Running GAMESS on Windows >> >> Sent to CCL by: Alexandr Isayev [alex*_*ccmsi.us] >> Mustafa, >> >> Get a PC GAMESS from Alexandr Granovsky http://classic.chem.msu.su/gran/gamess/ >> It natively runs under windows environment and has comprehensive >> manual. However for future production work, make sure to learn what is >> *nix, and you can eat it :^) >> >> hope this will help, >> Alexandr >> >> Wednesday, May 30, 2007, 5:25:00 PM, you wrote: >> >> MHmhyc> Sent to CCL by: "Mustafa Hussein" [mustafa.hussein86,yahoo.com] >> MHmhyc> Hi, >> MHmhyc> I have got a copy of GAMESS. I need to run it on Windows; is >> MHmhyc> it possible? If it is, I appreciate if you tell me how. >> >> MHmhyc> Thanks >> >> MHmhyc> Mustafa >> >> >> >> MHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhycMHmhyc> Conferences: >> MHmhyc> http://server.ccl.net/chemistry/announcements/conferences/ >> >> MHmhycMHmhycMHmhycMHmhycMHmhyc------------------------------------------------------- >> Alexandr Isayev, >> Graduate Research Assistant, and System Administrator >> [A] Computational Center for Molecular Structure >> and Interactions (CCMSI), >> Jackson State University, >> Jackson, MS USA >> Tel: +(601) 979-1134 >> e-mail: alex(at)ccmsi.us >> Web: http://www.ccmsi.us >> --------------------------------------------------------> >> >> >> AAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccms> Conferences: AAGgccms> http://server.ccl.net/chemistry/announcements/conferences/ AAGgccmsAAGgccmsAAGgccmsAAGgccmsAAGgccms------------------------------------------------------- Alexandr Isayev, Graduate Research Assistant, and System Administrator |a| Computational Center for Molecular Structure and Interactions (CCMSI), Jackson State University, Jackson, MS USA Tel: +(601) 979-1134 e-mail: alex(at)ccmsi.us Web: http://www.ccmsi.us -------------------------------------------------------- From owner-chemistry@ccl.net Thu May 31 21:10:00 2007 From: "Daniel M. Healion dhealion[a]gmail.com" To: CCL Subject: CCL: A Comprehensive book on theoretical chemistry Message-Id: <-34386-070531153444-11421-vWVCzRXQCkhxewZ/S3X8KA- -server.ccl.net> X-Original-From: "Daniel M. Healion" Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset=ISO-8859-1; format=flowed Date: Thu, 31 May 2007 11:39:14 -0700 MIME-Version: 1.0 Sent to CCL by: "Daniel M. Healion" [dhealion..gmail.com] Hi, Has anyone mentioned the two dover books on electronic structure yet? Szabo and Ostlund, Modern Quantum Chemistry, (Dover Publications, Mineola NY, 1996) David B. Cook, Handbook of Computational Quantum Chemistry, (Dover, NY, 2005) The first is an excellent introduction to the subject. It includes worked examples and references. The second is an exhaustive survey of the techniques needed to code your own quantum chemistry software. Both are very affordable. (under $15 on amazon) If you're coming from a pharmacy background, I think you may be interested in molecular dynamics simulations in addition to electronic structure methods. You might be interested in Andrew Leach, Molecular Modelling: Principles and Applications (Prentice-Hall, 2001) a very broad introduction to both subjects with references and applications. -Daniel Healion Karol Langner karol.langner+/-kn.pl wrote: >Sent to CCL by: Karol Langner [karol.langner(-)kn.pl] >On Thursday 31 May 2007 10:00, Xavier Assfeld >Xavier.Assfeld{:}cbt.uhp-nancy.fr wrote: > > >>Sent to CCL by: "Xavier Assfeld" [Xavier.Assfeld * cbt.uhp-nancy.fr] >>Hey, >> >>If you are looking for a good book, look at: >>Ideas of Quantum Chemistry by Lucjan Piela. >>http://www.elsevier.com/wps/find/bookdescription.cws_home/708726/description >> >> >#description > >Yes, I recommend this book, also. I have it (the older, Polish version) and >value it highly. > >- Karol > > > From owner-chemistry@ccl.net Thu May 31 21:45:01 2007 From: "J Hakan muro0000..gmail.com" To: CCL Subject: CCL:G: Help with gaussian ESP calculation Message-Id: <-34387-070531173924-24337-EC2ZncnG4jJGTPARuJ5qAQ .. server.ccl.net> X-Original-From: "J Hakan" Date: Thu, 31 May 2007 17:39:19 -0400 Sent to CCL by: "J Hakan" [muro0000~~gmail.com] Dear all: I'm trying to do some ESP calculation on a Ca(2+)-binding protein with Gaussian98. However, after about 2500 minutes running, the program terminated without either a word of "Normal termination" or "Error termination" at the end of the log file. It looks like the job crashed and the temporary files whose name beginning with "Gau" still exist. I have run the jobs two times but got the same problem each time. Below is my input file and the last several lines of the log file. Could someone help me with this problem? Thank you very much! -------------------------------------------------------------------------- %mem=40mw %chk=esp.chk hf/6-31g* pop=(mk,readradii) iop(6/33=2) esp 0 1 C 15.913 20.680 3.987 H 15.577 21.090 4.963 H 15.381 19.724 3.795 H 15.676 21.414 3.187 C 17.383 20.439 4.028 O 18.094 21.000 4.859 N 17.876 19.583 3.115 H 17.306 19.124 2.438 C 19.323 19.287 3.086 H 19.612 18.847 4.029 C 19.550 18.308 1.920 H 20.638 18.164 1.749 H 19.095 18.714 0.991 H 19.095 17.323 2.159 C 20.263 20.477 2.848 O 21.466 20.513 3.289 N 19.761 21.432 2.101 H 18.836 21.339 1.748 C 20.399 22.654 1.705 H 21.451 22.456 1.564 C 19.762 23.179 0.386 H 20.335 24.052 0.006 H 18.714 23.497 0.573 H 19.779 22.380 -0.386 C 20.308 23.774 2.716 O 20.938 24.806 2.381 N 19.575 23.714 3.810 H 19.047 22.910 4.073 C 19.518 24.891 4.710 H 19.359 25.764 4.094 C 18.408 24.783 5.749 H 18.192 25.798 6.146 H 18.761 24.139 6.582 C 17.125 24.195 5.190 H 17.322 23.132 4.937 H 16.877 24.748 4.260 C 15.912 24.237 6.087 H 16.148 24.870 6.968 H 15.695 23.205 6.433 C 14.670 24.790 5.417 H 13.750 24.368 5.874 H 14.683 24.586 4.325 N 14.691 26.305 5.643 H 15.676 26.635 5.692 H 14.205 26.529 6.535 H 14.205 26.780 4.855 C 20.850 25.230 5.356 O 21.095 26.403 5.708 N 21.712 24.225 5.481 H 21.479 23.317 5.145 C 23.041 24.322 6.095 H 23.483 25.257 5.784 C 22.948 24.263 7.628 H 22.243 25.060 7.938 H 23.958 24.498 8.021 C 22.497 22.988 8.309 H 23.154 22.181 7.929 H 21.456 22.806 7.975 C 22.483 22.840 9.784 O 21.712 22.085 10.377 O 23.348 23.512 10.428 C 23.926 23.111 5.717 O 23.431 22.091 5.231 N 25.202 23.257 6.025 H 25.478 24.113 6.444 C 26.332 22.357 5.858 H 26.203 21.519 6.527 H 27.236 22.894 6.103 C 26.411 21.850 4.405 O 26.426 22.713 3.545 N 26.406 20.558 4.254 H 26.407 19.941 5.037 C 26.399 19.902 2.919 H 27.119 20.393 2.282 C 26.771 18.427 3.145 H 25.959 17.939 3.724 H 27.714 18.382 3.730 C 26.972 17.650 1.861 O 26.381 18.028 0.833 O 27.645 16.610 1.834 C 24.967 20.187 2.432 O 24.060 19.850 3.236 N 24.807 20.851 1.298 C 25.880 21.287 0.384 H 26.560 20.438 0.163 H 26.452 22.122 0.840 C 23.496 21.205 0.755 H 22.859 21.580 1.540 C 23.805 22.224 -0.355 H 23.885 23.254 0.053 H 23.024 22.210 -1.145 C 25.116 21.746 -0.881 H 24.977 20.902 -1.590 H 25.659 22.565 -1.399 C 22.752 20.036 0.161 O 21.648 20.248 -0.356 N 23.395 18.883 0.208 H 24.276 18.853 0.667 C 23.014 17.605 -0.320 H 22.253 17.769 -1.068 C 24.241 16.859 -0.953 H 23.964 15.801 -1.147 H 25.093 16.889 -0.241 C 24.672 17.491 -2.249 O 23.808 17.680 -3.114 N 25.984 17.783 -2.271 H 26.505 17.809 -1.418 H 26.439 17.974 -3.141 C 22.575 16.532 0.692 O 22.029 15.530 0.177 N 22.911 16.765 1.910 H 23.374 17.614 2.147 C 22.677 15.879 3.041 H 21.984 15.104 2.751 C 24.061 15.295 3.404 H 23.947 14.447 4.112 H 24.695 16.075 3.877 C 24.715 14.801 2.064 H 25.225 15.631 1.530 H 23.962 14.341 1.390 C 25.718 13.766 2.551 O 25.388 12.598 2.645 N 26.865 14.271 2.997 H 27.220 15.123 2.611 H 27.372 13.799 3.718 C 22.034 16.581 4.228 O 22.102 17.828 4.354 N 21.381 15.729 5.032 H 21.346 14.750 4.846 C 20.689 16.172 6.215 H 20.444 17.213 6.065 C 19.399 15.384 6.542 H 18.963 15.823 7.463 H 19.692 14.333 6.745 C 18.319 15.359 5.498 H 18.794 15.214 4.505 C 17.283 14.260 5.703 H 17.777 13.265 5.704 H 16.538 14.285 4.880 H 16.769 14.402 6.678 C 17.604 16.733 5.483 H 18.353 17.553 5.474 H 16.972 16.840 6.390 H 16.972 16.820 4.574 C 21.636 16.045 7.442 O 22.319 15.061 7.596 N 21.542 17.069 8.215 H 20.970 17.819 7.907 C 22.132 17.357 9.504 H 23.069 16.826 9.584 C 22.348 18.862 9.591 H 22.565 19.259 8.576 H 23.209 19.069 10.261 O 21.219 19.539 10.099 H 21.487 20.454 10.209 C 21.032 16.843 10.465 O 19.882 16.549 10.014 N 21.338 16.616 11.710 H 22.259 16.715 12.080 C 20.256 16.182 12.648 H 19.860 15.240 12.297 C 20.815 16.036 14.022 H 20.804 17.052 14.461 H 21.863 15.705 13.887 C 20.227 15.122 15.082 H 20.344 14.055 14.798 H 19.148 15.335 15.239 C 21.049 15.453 16.351 H 20.444 16.115 17.005 H 21.972 15.992 16.048 C 21.442 14.220 17.137 H 22.356 13.752 16.714 H 20.612 13.483 17.165 N 21.734 14.699 18.554 H 22.419 14.058 19.003 H 20.853 14.706 19.106 H 22.129 15.660 18.520 C 19.192 17.300 12.682 O 18.000 16.979 12.763 N 19.517 18.570 12.621 H 20.473 18.824 12.517 C 18.629 19.706 12.688 H 18.083 19.659 13.619 C 19.459 20.993 12.610 H 18.793 21.807 12.255 H 20.265 20.834 11.863 C 20.110 21.455 13.909 H 20.908 22.196 13.690 H 20.556 20.586 14.439 C 19.054 22.094 14.786 O 18.381 21.417 15.561 O 18.984 23.329 14.572 C 17.628 19.868 11.553 O 16.458 20.276 11.721 N 18.199 19.636 10.386 H 19.172 19.430 10.321 C 17.477 19.658 9.100 H 16.909 20.575 9.048 C 18.474 19.576 7.932 H 17.924 19.171 7.058 H 19.267 18.858 8.226 C 19.167 20.856 7.478 H 19.487 21.409 8.386 H 18.425 21.465 6.921 C 20.367 20.706 6.602 O 20.994 21.604 6.058 O 20.760 19.520 6.439 C 16.540 18.475 9.026 O 15.427 18.607 8.514 N 16.993 17.317 9.539 H 17.896 17.223 9.951 C 16.168 16.150 9.509 H 16.758 15.270 9.844 H 15.810 15.970 8.472 H 15.302 16.285 10.191 CA 22.527 19.883 5.062 O 24.180 18.687 6.571 H 24.968 18.261 6.234 H 24.467 19.123 7.373 CA 1.712 ------------------------------------------------------------------------- Entering DenBas... DenBas was handed 40013023 working-precision words. Calculate electrostatic properties NBasis = 1902 MinDer = 0 MaxDer = 0 NGrid = 5340 NMatD = 1 Requested accuracy = 0.1000D-05 PRISM was handed 36414244 working-precision words and 26407 shell-pairs 5121 points will be used for fitting atomic charges Fitting point charges to eletrostatic potential ------------------------------------------------------------------------- J. Hakan muro0000 _ gmail.com