From owner-chemistry@ccl.net Mon May 25 01:12:01 2015 From: "Narges Masoumi nmasoumi*_*asu.edu" To: CCL Subject: CCL:G: Gaussian error #2070: Density matrix breaks symmetry, PCut= 1.00D-04 Message-Id: <-51395-150525004924-12328-N+VUxF7tiQkQYi11YMx0+A=server.ccl.net> X-Original-From: "Narges Masoumi" Date: Mon, 25 May 2015 00:49:23 -0400 Sent to CCL by: "Narges Masoumi" [nmasoumi{=}asu.edu] I have a molecule with point group C1 or Cs. We want to keep in the D3h(planar) point group. I want to optimize this structure with point group D3h. Using Gaussian, I get the following error: .. of initial guess= 0.7500 Requested convergence on RMS density matrix=1.00D-08 within 128 cycles. Requested convergence on MAX density matrix=1.00D-06. Requested convergence on energy=1.00D-06. No special actions if energy rises. Integral accuracy reduced to 1.0D-05 until final iterations. Density matrix breaks symmetry, PCut= 1.00D-04 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Rare condition: small coef for last iteration: 0.000D+00 Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Rare condition: small coef for last iteration: 0.000D+00 Problem detected with inexpensive integrals. Switching to full accuracy and repeating last cycle. Density matrix breaks symmetry, PCut= 1.00D-07 Density has only Abelian symmetry. Density matrix breaks symmetry, PCut .. Restarting incremental Fock formation. >>>>>>>>>> Convergence criterion not met. SCF Done: E(UHF) = -558.509958814 A.U. after 129 cycles Convg = 0.6359D-04 -V/T = 2.0040 S**2 = 1.2492 Annihilation of the first spin contaminant: S**2 before annihilation 1.2492, after 0.9162 Convergence failure -- run terminated. Error termination via Lnk1e in C:\G03W\l502.exe at Sun May 24 20:13:34 2015. Job cpu time: 0 days 0 hours 4 minutes 1.0 seconds. File lengths (MBytes): RWF= 26 Int= 0 D2E= 0 Chk= 1 Scr= 1 and Gaussian stops after around 1 minute with error 2070. When I use Symmetry=None as an additional keyword, the calculation completes but the structure remains C1. Any ideas about how to resolve this problem? From owner-chemistry@ccl.net Mon May 25 17:34:01 2015 From: "Tim Dudgeon tdudgeon.ml-.-gmail.com" To: CCL Subject: CCL: Autodock in Windows Message-Id: <-51396-150525164132-27390-jur/QJqXPeUpciokx2/TaA- -server.ccl.net> X-Original-From: Tim Dudgeon Content-Type: multipart/alternative; boundary="------------070005080706040809090501" Date: Mon, 25 May 2015 21:41:25 +0100 MIME-Version: 1.0 Sent to CCL by: Tim Dudgeon [tdudgeon.ml*gmail.com] This is a multi-part message in MIME format. --------------070005080706040809090501 Content-Type: text/plain; charset=utf-8; format=flowed Content-Transfer-Encoding: 7bit You'll need to say which version of Autodock you used, and give some info about the error you got. Without that nobody can help you much. And probably contacting Scripps might be more likely to get the info you need. On 23/05/2015 06:48, Partha Sengupta anapspsmo,gmail.com wrote: > Friends, I was unable to install and run Autodock in my Windows 7 > platform 62 bit/32 bit. Please help stating the step wise installation > process and the process of running > Partha. > > -- > Dr. Partha Sarathi Sengupta > Associate Professor > Vivekananda Mahavidyalaya, Burdwan --------------070005080706040809090501 Content-Type: text/html; charset=utf-8 Content-Transfer-Encoding: 7bit You'll need to say which version of Autodock you used, and give some info about the error you got.
Without that nobody can help you much.
And probably contacting Scripps might be more likely to get the info you need.

On 23/05/2015 06:48, Partha Sengupta anapspsmo,gmail.com wrote:
Friends, I was unable to install and run Autodock in my Windows 7 platform 62 bit/32 bit. Please help stating the step wise installation process and the process of running
Partha.

--
Dr. Partha Sarathi Sengupta
Associate Professor
Vivekananda Mahavidyalaya, Burdwan

--------------070005080706040809090501-- From owner-chemistry@ccl.net Mon May 25 18:09:01 2015 From: "Safiya Ess Amer amersaf85-.-yahoo.com" To: CCL Subject: CCL:G: Basis Sets IGLO-II and IGLO-III Message-Id: <-51397-150525155253-8551-QNSjPFHTOevCmTcyLC0sdQ]![server.ccl.net> X-Original-From: "Safiya Ess Amer" Date: Mon, 25 May 2015 15:52:51 -0400 Sent to CCL by: "Safiya Ess Amer" [amersaf85[#]yahoo.com] Hi all When I use Basis Sets IGLO-II and IGLO-III with GFprint keyword in G03W, I do not get same coefficients as one in EMLS web site. why? IGLO-II basis set for H atom, from EMLS web site: **** H 0 S 3 1.00 33.6444000 0.61200000E-02 5.0579600 0.45750000E-01 1.1468000 0.20572000 S 1 1.00 0.32114400 1.0000000 S 1 1.00 0.10130900 1.0000000 P 1 1.00 0.6500000 1.0000000 **** > from output of Gaussian: (I did not copy all coefficients from output, only for first S shell) 0.3364440000D+02 0.2537397018D-01 0.5057960000D+01 0.1896828653D+00 0.1146800000D+01 0.8529302525D+00 Safiya Amer Graduate Student amersaf85]^[yahoo.com